Seed: a user-friendly tool for exploring and visualizing microbial community data
نویسندگان
چکیده
SUMMARY In this article we present Simple Exploration of Ecological Data (Seed), a data exploration tool for microbial communities. Seed is written in R using the Shiny library. This provides access to powerful R-based functions and libraries through a simple user interface. Seed allows users to explore ecological datasets using principal coordinate analyses, scatter plots, bar plots, hierarchal clustering and heatmaps. AVAILABILITY AND IMPLEMENTATION Seed is open source and available at https://github.com/danlbek/Seed. CONTACT [email protected] SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online.
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عنوان ژورنال:
دوره 31 شماره
صفحات -
تاریخ انتشار 2015